Innate T cells

Explore gene expression along the T cell innateness gradient.


Low input RNA-seq with sorted T cell populations

Association with innateness gradient

Single-cell RNA-seq expression and cell clusters



Correlated genes in low input RNA-seq data


Read the paper

Lymphocyte innateness defined by transcriptional states reflects a balance between proliferation and effector functions

Maria Gutierrez-Arcelus, Nikola Teslovich, Alex R. Mola, Rafael B. Polidoro, Aparna Nathan, Hyun Kim, Susan Hannes, Kamil Slowikowski, Gerald F. M. Watts, Ilya Korsunsky, Michael B. Brenner, Soumya Raychaudhuri & Patrick J. Brennan.

Nature Communications 2019. doi.org/10.1038/s41467-019-08604-4

Contact us

Please contact Dr. Maria Gutierrez-Arcelus with any questions, requests, or comments.

Get the data

The data presented here comes from the laboratories of:

Download the data from NCBI GEO:

Get the code

Get the code for the analysis:

Get the code for this website:

Disclaimer

The content of this site is subject to change at any time without notice. We hope that you find it useful, but we provide it 'as is' without warranty of any kind, express or implied.